Schedule

Microscopic Image Processing, Analysis, Classification and Modelling Environment


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List and schedule of milestones

Milestone

n.

Milestone name

WP n'/ Deliverable n

Lead Beneficiary/ Partner organisation short name

Delivery date

Comments

1

WP1 survey report

1 / 1

BILKENT

April    2010

Report on current methods of feature extraction for microscopic images.

2

Best wavelets for FL images

1 /2

BILKENT

June    2010

Find the best feature vector for FL images. Determine which wavelet scales should be used.

3

Covariance method for microscopic images

1 / 3

BILKENT

September 2010

Use of covariance method in microscopic images.

4

Co-difference method for microscopic images

1 / 4

BILKENT

September 2010

Comparison between the co-difference and covariance methods.

5

WP1 Final Report

1 / 5

BILKENT

September 2010

Final Report on the scientific work carried out in WP1 during the exchange program.

6

WP2 Survey Report

2 / 6

ITI-CERTH

March 2011

Report on segmentation methods for FL images.

7

FL image segmentation using MRF

2 / 7

ITI-CERTH

May    2011

The goal is to segment the image to nuclei, cytoplasm, extracellular material, background and red-blood cells.

8

FL image segmentation using covariance and/or co-difference methods

2 / 8-9

ITI-CERTH

May    2011

Comparison of MRF and covariance based segmentation methods.

8

Registration of IHC and H&E images

2 / 10

ITI-CERTH

August 2011

This will improve the overall image segmentation task

9

WP2 Final Report

2 / 11

ITI-CERTH

August 2011

Final Report on the scientific work carried out in WP2 during the exchange program

10

WP3 Survey Report

3 / 12

OSU, GRECAN

June   2011

Report on current methods of FL image analysis.

11

Identification of follicle regions

3 /13

OSU, GRECAN

September 2011

Identification of follicle regions in FL images

12

Identification of centroblast and non-centroblast regions

3 / 14

OSU, GRECAN

November 2011

Classification of centroblast regions in FL images using a machine learning algorithm

13

Overall system optimization

3 / 15

OSU, GRECAN

March  2012

Individual image analysis components will be optimized

14

WP3 Final Report

3 / 16

OSU, GRECAN

March 2012

Final Report on the scientific work carried out in WP3 during the exchange program

15

WP4 Survey Report

4 / 17

WARWICK

June   2010

Report on the current methods of microscopic image compression.

16

Image coding using a modified colour transform

4 / 18

WARWICK

September 2010

This colour transform method will be integrated to JPEG and JPEG2000 standards

17

Image coding using adaptive wavelet transform (AWT)

4 / 19

WARWICK

September 2011

This new microscopic image coding scheme will use both AWT and the colour transform

18

WP4 Final Report

4 / 20

WARWICK

September 2011

Final Report on the scientific work carried out in WP4 during the exchange program

19

Microscopic image database

5 / 21

ITI-CERTH

August 2012

The database will be continuously updated throughout the project

20

Online annotation tool for FL images

5 / 22

ITI-CERTH

December 2011

Online annotation tool will be adaptive and it will help experts to annotate microscopic images

21

WP5 Final Report

5 / 23

ITI-CERTH

August 2012

Final Report on the scientific work carried out in WP5 during the exchange program

22

Web page for the exchange programme

6 / 24

BILKENT

November 2009

The web page will be continuously updated throughout the project.

23

Workshop organization

6 / 25-26

BILKENT

May 2010, June 2011

Two workshops will be organized

24

Special issues

6 / 27

BILKENT

August 2012

Special issues will be published in scientific journals

25

Tutorials in conferences

6 / 28

BILKENT

May 2012

Tutorials will be presented in scientific conferences

26

WP6 Final Report

5 / 29

BILKENT

August 2012

Final Report on the work carried out in WP6 during the exchange program

May
25 - decided to build tree house
29 - obtain supplies from art store for prototype
June
01 - have prototype sketched
07 - CAD drawings completed
15 - model tree house completed
17 - start construction of tree house
July
04 - tree house completed
 

 

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Last updated: 07/06/12.